PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692155.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 458aa MW: 51134.1 Da PI: 5.6197

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.1	1.4e-10	125	172	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt.aeeAakaaiaarkk 52 s+ +GV++++++ rW+++ +d k ++lg f+t + Aa+a+++ k XP_021692155.1 125 SQNRGVTFYRRTERWESHSWDE-----GKLVHLGEFDTaHAAAARAYDRTSIK 172 678*************8884.....4********777999999987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MSDVTLNAES VESTQNSEQK EGERLGNSDS SIVSLLRDAA NDNNKVVDDI VEVGGGGNGI 60 ENENDAPVTN ELSLGSNGRE VGKDFGNYQV QAGQENLSFE IGQEISGGEV QGNTRRRRGP 120 RSKSSQNRGV TFYRRTERWE SHSWDEGKLV HLGEFDTAHA AAARAYDRTS IKFKGVEADI 180 NFSLSDSETD LVQINVQMKN LTKEEHTFRR PRTRFSRESP FGNSHRESEE HIQPNSGSYD 240 VDSRDSRGQT EDNEIQSCLA SPPPHSPETD HFGCMDVEHG NGICRTCCRT QNLKRKVKVE 300 IKALEWMFAI ANFIVELLSI VFEQLSSQHY SLFLPICVGM SFLALFICTS ELAYKAQKER 360 ATWRWCGTIP WFYYPSQSGI RLGSVMDIAA LVCAFGQCIL TIVGYCLFLR NGNNPIKISI 420 WASVFACCQL CSKFCGEFKH EVHGQDTLPV LNAPSLCH

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MSDVTLNAES VESTQNSEQK EGERLGNSDS SIVSLLRDAA NDNNKVVDDI VEVGGGGNGI  60
ENENDAPVTN ELSLGSNGRE VGKDFGNYQV QAGQENLSFE IGQEISGGEV QGNTRRRRGP  120
RSKSSQNRGV TFYRRTERWE SHSWDEGKLV HLGEFDTAHA AAARAYDRTS IKFKGVEADI  180
NFSLSDSETD LVQINVQMKN LTKEEHTFRR PRTRFSRESP FGNSHRESEE HIQPNSGSYD  240
VDSRDSRGQT EDNEIQSCLA SPPPHSPETD HFGCMDVEHG NGICRTCCRT QNLKRKVKVE  300
IKALEWMFAI ANFIVELLSI VFEQLSSQHY SLFLPICVGM SFLALFICTS ELAYKAQKER  360
ATWRWCGTIP WFYYPSQSGI RLGSVMDIAA LVCAFGQCIL TIVGYCLFLR NGNNPIKISI  420
WASVFACCQL CSKFCGEFKH EVHGQDTLPV LNAPSLCH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60120.1	1e-25	AP2 family protein