PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692199.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 452aa MW: 50479.2 Da PI: 5.467

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.1	1.4e-10	125	172	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt.aeeAakaaiaarkk 52 s+ +GV++++++ rW+++ +d k ++lg f+t + Aa+a+++ k XP_021692199.1 125 SQNRGVTFYRRTERWESHSWDE-----GKLVHLGEFDTaHAAAARAYDRTSIK 172 678*************8884.....4********777999999987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSDVTLNAES VESTQNSEQK EGERLGNSDS SIVSLLRDAA NDNNKVVDDI VEVGGGGNGI 60 ENENDAPVTN ELSLGSNGRE VGKDFGNYQV QAGQENLSFE IGQEISGGEV QGNTRRRRGP 120 RSKSSQNRGV TFYRRTERWE SHSWDEGKLV HLGEFDTAHA AAARAYDRTS IKFKGVEADI 180 NFSLSDSETD LVQINVQMKN LSKEEHTFRR PRTRFSRESP FGNSHRESEE HIQPNSGSYD 240 VDSRDSRGQI EDNEIQSCLA SPPPHSPETD HFGCMDVEHG NGICRTCCRT QNLKRKALEW 300 MFAIANFIVE LLSIVFEQLS SQHYSLFLPI CVGMSFLALF ICTFELAYKA QKERATWRWC 360 GTIPWFYYPS QSGIRLGSVM DIAALVCAFG QCILTIVGYC LFLRNGNNPI KISIWASVFA 420 SCQLCSKFCG EFKHEVHGQD TLPVLNAPSL CH

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSDVTLNAES VESTQNSEQK EGERLGNSDS SIVSLLRDAA NDNNKVVDDI VEVGGGGNGI  60
ENENDAPVTN ELSLGSNGRE VGKDFGNYQV QAGQENLSFE IGQEISGGEV QGNTRRRRGP  120
RSKSSQNRGV TFYRRTERWE SHSWDEGKLV HLGEFDTAHA AAARAYDRTS IKFKGVEADI  180
NFSLSDSETD LVQINVQMKN LSKEEHTFRR PRTRFSRESP FGNSHRESEE HIQPNSGSYD  240
VDSRDSRGQI EDNEIQSCLA SPPPHSPETD HFGCMDVEHG NGICRTCCRT QNLKRKALEW  300
MFAIANFIVE LLSIVFEQLS SQHYSLFLPI CVGMSFLALF ICTFELAYKA QKERATWRWC  360
GTIPWFYYPS QSGIRLGSVM DIAALVCAFG QCILTIVGYC LFLRNGNNPI KISIWASVFA  420
SCQLCSKFCG EFKHEVHGQD TLPVLNAPSL CH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60120.1	7e-26	AP2 family protein