PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692254.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 273aa    MW: 31695.8 Da    PI: 10.1
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.33.1e-3152101150
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                     krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+
  XP_021692254.1  52 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 101
                     79***********************************************8 PP
2K-box110.32e-361202164100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s+  s++ea+++ +qqe++kL+++i+++q+ +Rh+lGe L++LslkeL++Le++Lek++++iRskKne+l+++ie++qk+e elq++n+ Lr+k+
  XP_021692254.1 120 SNPASASEANTQFYQQESSKLRRQIREIQNLNRHILGEALGTLSLKELKNLESRLEKGISRIRSKKNEMLFAEIEYMQKREIELQNDNMFLRAKI 214
                     3444599***************************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_021692254.1 215 AE 216
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MKKYNSFSNT KQSVYVSEQK PKSNLTTLEF PNQEPDQGPS LRKTGRGKIE IKRIENTTNR  60
QVTFCKRRNG LLKKAYELSV LCDAEVALIV FSTRGRLYEY ANNSVRATIE RYKKANADSS  120
NPASASEANT QFYQQESSKL RRQIREIQNL NRHILGEALG TLSLKELKNL ESRLEKGISR  180
IRSKKNEMLF AEIEYMQKRE IELQNDNMFL RAKIAENERA QQQQQQQQTN LMPSGSVYES  240
VPSQQYDRNF FPVNLLEPNH HYSRPDHTAL QLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42830.11e-113MIKC_MADS family protein