PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692399.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 471aa    MW: 53998.9 Da    PI: 4.8543
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS248.42.8e-761014642373
            GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                      +lLl  Aeav++++ +  ++++ +l++l     ++g++++Rla +ft++L+ r     ++++++++    +  +++++++a+++ +e+sP+ kf
  XP_021692399.1 101 ADLLLMGAEAVEAQNWTFSSTIILKLRDLlfeGENEGNSFNRLALFFTQGLHYRSII--TNTSETMHELGFK--QTVDSISAFHVMQELSPYAKF 191
                     5799999*********************988778899***************98554..4555555555554..4689***************** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea++g++++HiiDfdi +G+QWp+L+  La R++  +sl++T++ s +++++ ++++tg+rL+++A++++ +f f+ +v+ + +d
  XP_021692399.1 192 AHFTANQAILEATQGDQEIHIIDFDILEGIQWPPLMADLAMRKNH-ASLKLTAMIS-DQQDAAAIQQTGRRLKEYADSINFSFVFEQMVMANEDD 284
                     ******************************************665.8******999.56799*************************98888888 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsleaklpres 279
                     +    L+++ g al+ n++++  +++d+  sl +   ++L+ + +ls+k+vv+v++e    a+  s sF+e f eal++y+al dsl ++l+   
  XP_021692399.1 285 F----LSIEVGHALVANCMIHQLYMPDRCFSLVK---TFLEGMSRLSSKLVVLVQEElfnfAKIPSMSFVEFFREALHHYTALSDSLVNSLSGGY 372
                     8....99*************999***99999999...********************8877778999********************88887665 PP

            GRAS 280 ..eerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                        e + +E+e+lg +i + v++   e+    +++  Wr+ + +  GFkp+pls+++++qa+ l++ ++  gy v++e+  l l+Wk+rpL+s+S
  XP_021692399.1 373 ynTELKLIEKEFLGIRILESVCKFPCEK----KEKLLWRDGFASlKGFKPIPLSSYNVSQANFLVSLFN-GGYWVQHEKCRLALYWKSRPLTSAS 462
                     5588899***************999994....44556****98868***********************.89*********************** PP

            GRAS 372 aW 373
                      W
  XP_021692399.1 463 IW 464
                     ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MHQCSPETFL SFQAEDPITI IQDRVVFYPN CIGRLLEIEK DLMDISSMNQ DSIMDLESFL  60
YMSELSRHMN QETQENMSKL REENSMLKGI QEELMEESSL ADLLLMGAEA VEAQNWTFSS  120
TIILKLRDLL FEGENEGNSF NRLALFFTQG LHYRSIITNT SETMHELGFK QTVDSISAFH  180
VMQELSPYAK FAHFTANQAI LEATQGDQEI HIIDFDILEG IQWPPLMADL AMRKNHASLK  240
LTAMISDQQD AAAIQQTGRR LKEYADSINF SFVFEQMVMA NEDDFLSIEV GHALVANCMI  300
HQLYMPDRCF SLVKTFLEGM SRLSSKLVVL VQEELFNFAK IPSMSFVEFF REALHHYTAL  360
SDSLVNSLSG GYYNTELKLI EKEFLGIRIL ESVCKFPCEK KEKLLWRDGF ASLKGFKPIP  420
LSSYNVSQAN FLVSLFNGGY WVQHEKCRLA LYWKSRPLTS ASIWVPIPKS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.14e-48GRAS family protein