PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692453.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 350aa MW: 38844.5 Da PI: 7.7559

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q G+g +W + ++++g++R++k+c++rw++yl XP_021692453.1 14 KGPWSPEEDTKLKAYIEQNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.5	5.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_021692453.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDTKLKAYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQARRA TLRQEIKRES QSFMVPGIMN QQTHNYWPEL PAAAVMPAMN PTQYSHFWDQ 180 ESLRSLLIKL GGRFSENHQE SNIASSVYSL DGSCNSTQDH PYSSSVNILS SSGASMNSTD 240 SPCSQLPNPN YAVSGAGPSI YHGLEEFPVE LHELVYGNQQ QFGGLKSFNG MDMANGGYVT 300 NGAISSGEST TWGNVSSLAY PQLVSELETC LQSLPQDHSS FEVSSYFGPQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDTKLKAYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQARRA TLRQEIKRES QSFMVPGIMN QQTHNYWPEL PAAAVMPAMN PTQYSHFWDQ  180
ESLRSLLIKL GGRFSENHQE SNIASSVYSL DGSCNSTQDH PYSSSVNILS SSGASMNSTD  240
SPCSQLPNPN YAVSGAGPSI YHGLEEFPVE LHELVYGNQQ QFGGLKSFNG MDMANGGYVT  300
NGAISSGEST TWGNVSSLAY PQLVSELETC LQSLPQDHSS FEVSSYFGPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-80	MYB family protein