PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692542.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 246aa MW: 28002.3 Da PI: 9.1078

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	197.3	6.4e-61	6	163	2	163
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++f+ +eq+CyvqC+fC+til+vsvP +sl++vvtvrCGhCtsllsvn++k s q la+ sh ++ kee+ e+ +++++l+ ++++s+ XP_021692542.1 6 HLFDLPEQICYVQCGFCDTILLVSVPCSSLSMVVTVRCGHCTSLLSVNMMKVSfvpfQFLASLSH--DQQKEEVSPEEVDAQKALD---IQRSSS 95 7899********************************************999777677788777..4445555555444444443...444444 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 + s ++l++ +++ v r +++PPekrqr+Psaynrfikeei+r+ka+nP+++h+eafs+aakn + + XP_021692542.1 96 MVAYSDNELED-DRNPVNR--IINKPPEKRQRAPSAYNRFIKEEIRRLKAENPSMAHKEAFSTAAKNVSSM 163 44444444433.3334444..589*****************************************8766 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MATLNHLFDL PEQICYVQCG FCDTILLVSV PCSSLSMVVT VRCGHCTSLL SVNMMKVSFV 60 PFQFLASLSH DQQKEEVSPE EVDAQKALDI QRSSSMVAYS DNELEDDRNP VNRIINKPPE 120 KRQRAPSAYN RFIKEEIRRL KAENPSMAHK EAFSTAAKNV SSMSNHAFFK TLNLDDTNKR 180 STIMFQSWTC SIVFSGPISH QFIIKKVEKV LARKKRRHHG VVMQSRSTLE AKVSMKERFQ 240 GIPPFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	7e-66	YABBY family protein