PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692543.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 209aa MW: 23541.7 Da PI: 6.3915

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	220.2	5.9e-68	6	169	2	169
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++f+ +eq+CyvqC+fC+til+vsvP +sl++vvtvrCGhCtsllsvn++k s q la+ sh ++ kee+ e+ +++++l+ ++++s+ XP_021692543.1 6 HLFDLPEQICYVQCGFCDTILLVSVPCSSLSMVVTVRCGHCTSLLSVNMMKVSfvpfQFLASLSH--DQQKEEVSPEEVDAQKALD---IQRSSS 95 7899********************************************999777677788777..4445555555444444443...444444 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 + s ++l++ +++ v r +++PPekrqr+Psaynrfikeei+r+ka+nP+++h+eafs+aaknWa fP+ih++ XP_021692543.1 96 MVAYSDNELED-DRNPVNR--IINKPPEKRQRAPSAYNRFIKEEIRRLKAENPSMAHKEAFSTAAKNWANFPPIHYK 169 44444444433.3334444..589*************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MATLNHLFDL PEQICYVQCG FCDTILLVSV PCSSLSMVVT VRCGHCTSLL SVNMMKVSFV 60 PFQFLASLSH DQQKEEVSPE EVDAQKALDI QRSSSMVAYS DNELEDDRNP VNRIINKPPE 120 KRQRAPSAYN RFIKEEIRRL KAENPSMAHK EAFSTAAKNW ANFPPIHYKE GGESVGQEEE 180 KAPWSCDAIE VNTGGKGFHE RKVPRHSTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	2e-77	YABBY family protein