PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692602.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 277aa    MW: 31596.6 Da    PI: 7.42
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.81.4e-091661346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT+eE + + +a + +  +   +W+++a++++ g+t ++++  ++ 
   XP_021692602.1 16 EWTKEENKEFERALAIYDEHepdRWTKVAAMIP-GKTVYDVIKQYRE 61
                     7*****************99*************.********99986 PP
2Myb_DNA-binding38.82.1e-12116160347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W+ I+r +   +t+ q+ s+ qky
   XP_021692602.1 116 PWTEDEHRLFLLGLLKHGKGDWRNISRNFVVSKTPTQVASHAQKY 160
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
METIHPSLYW FSQSTEWTKE ENKEFERALA IYDEHEPDRW TKVAAMIPGK TVYDVIKQYR  60
ELEEDVSDIE AGKIPIPGYV SSPIALDWVE DRNFDAYRKR PLPTKNGDQE RKKGVPWTED  120
EHRLFLLGLL KHGKGDWRNI SRNFVVSKTP TQVASHAQKY FIRQQLSGVK DKRRPSIHDI  180
TTVNLTTTPS EGNKLPSLDH SNALLSQNAT SMQKMLIDWN DSKNGSIMVF DSSQGNLLVS  240
SPSGIASNGF KLQEQNLYAG AHIIPHNLVF QRHQIPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.12e-80MYB family protein