PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692777.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 362aa MW: 40682 Da PI: 6.7057

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ v +G g+W+ ++++ g++R++k+c++rw +yl XP_021692777.1 14 RGLWTAEEDAKILAHVSNHGIGNWTMVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	52.2	1.5e-16	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T++E+el+++++k G++ W++Iar+++ gRt++++k++w++ XP_021692777.1 68 DNFTPQEEELIINLHKAIGSR-WSLIARELP-GRTDNDVKNYWNT 110 68*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRPPCCDKS NVKRGLWTAE EDAKILAHVS NHGIGNWTMV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDNF TPQEEELIIN LHKAIGSRWS LIARELPGRT DNDVKNYWNT KLRKKLSKMG 120 IDPVTHKPFS QMLSDYGNIN WISNTGNQIA SFNKNLNSNL FSKPESSPVL TGSSSSNNVT 180 LKPPIEQVQE NSFASNSCSW ELLPQFQVTN HEIMQQHLFN EVSSSCSSSS STTVTQLNSP 240 RSYTCQQSQP PIKPSSSCLW SEFLISDSDP LGYSDFQQQQ QEQDSHGVMS SISTQNDIFQ 300 GKFTSGNEDF GSYDQRGING NQTNNYTDAS SSSASSFVDG ILDKDREMRS QFPELLYPSF 360 DY

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRPPCCDKS NVKRGLWTAE EDAKILAHVS NHGIGNWTMV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDNF TPQEEELIIN LHKAIGSRWS LIARELPGRT DNDVKNYWNT KLRKKLSKMG  120
IDPVTHKPFS QMLSDYGNIN WISNTGNQIA SFNKNLNSNL FSKPESSPVL TGSSSSNNVT  180
LKPPIEQVQE NSFASNSCSW ELLPQFQVTN HEIMQQHLFN EVSSSCSSSS STTVTQLNSP  240
RSYTCQQSQP PIKPSSSCLW SEFLISDSDP LGYSDFQQQQ QEQDSHGVMS SISTQNDIFQ  300
GKFTSGNEDF GSYDQRGING NQTNNYTDAS SSSASSFVDG ILDKDREMRS QFPELLYPSF  360
DY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	1e-84	MYB family protein