PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692778.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 334aa    MW: 37606.6 Da    PI: 6.3072
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +++  v  +G g+W+ ++++ g++R++k+c++rw +yl
   XP_021692778.1 14 RGLWTAEEDAKILAHVSNHGIGNWTMVPKKAGLNRCGKSCRLRWTNYL 61
                     788*******************************************97 PP
2Myb_DNA-binding52.31.3e-1668110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +++T++E+el+++++k  G++ W++Iar+++ gRt++++k++w++
   XP_021692778.1  68 DNFTPQEEELIINLHKAIGSR-WSLIARELP-GRTDNDVKNYWNT 110
                      68*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGRPPCCDKS NVKRGLWTAE EDAKILAHVS NHGIGNWTMV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDNF TPQEEELIIN LHKAIGSRWS LIARELPGRT DNDVKNYWNT KLRKKLSKMG  120
IDPVTHKPFS QMLSDYESSP VLTGSSSSNN VTLKPPIEQV QENSFASNSC SWELLPQFQV  180
TNHEIMQQHL FNEVSSSCSS SSSTTVTQLN SPRSYTCQQS QPPIKPSSSC LWSEFLISDS  240
DPLGYSDFQQ QQQEQDSHGV MSSISTQNDI FQGKFTSGNE DFGSYDQRGI NGNQTNNYTD  300
ASSSSASSFV DGILDKDREM RSQFPELLYP SFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.15e-83MYB family protein