PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131252.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 300aa MW: 33656.7 Da PI: 5.6851

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+d+v+ G g+W++ ++ g++R++k+c++rw +yl XP_022131252.1 14 KGPWTAEEDEKLIDYVANNGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.6	5.3e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022131252.1 67 RGKFSPEEEASIIKLHSFLGNR-WSRIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGRSPCCDEN GVKKGPWTAE EDEKLIDYVA NNGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SPEEEASIIK LHSFLGNRWS RIASHLPGRT DNEIKNFWNT HLRKKLLQMG 120 IDPNTHKPRT DLNPFLNISQ LFNGITSPLN SDHLKLQAEI AKLQLLQNLC QLLNTPTIIP 180 YVANSAMDGL QNPNPNPNQF QAGFSTGFVS VPGFEDGRKN KAELEERCDY VQVEETENYY 240 PVLPPLISES PGSASNVNQI ESEISNSPAA DSSIFDSLES LMNDEEANGS YWNDILRSTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	4e-83	MYB family protein