PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131259.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 202aa MW: 22695.8 Da PI: 8.9565

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.9	1.8e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCda+v+v+ifs++g+lye+ss XP_022131259.1 9 KRIENSTSRQVTFSKRRNGLLKKAYELSVLCDAQVSVLIFSQKGRLYEFSS 59 79***********************************************96 PP
2	K-box	57.4	6.1e-20	80	155	8	82
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 + +e +++l+qe++ k+ie L+++q +llG +L+s+slkeL+++e+qLe sl++iR++K +ll+e+ +l XP_022131259.1 80 AfRSEGYMQQLKQEAEMTAKKIEHLENSQQKLLGRGLDSCSLKELREIERQLELSLSRIRERKGKLLTEENAKLSA 155 34677789*************************************************************9888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MVRGKVEMKR IENSTSRQVT FSKRRNGLLK KAYELSVLCD AQVSVLIFSQ KGRLYEFSSS 60 DMQKSIERYH KYGKDGQTNA FRSEGYMQQL KQEAEMTAKK IEHLENSQQK LLGRGLDSCS 120 LKELREIERQ LELSLSRIRE RKGKLLTEEN AKLSAKCGAE PWQAEEGGGG GDAEGGIVGL 180 CSQSSKSNSD MQTELFIGLP CM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.4	2e-72	MIKC_MADS family protein