PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131277.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 649aa MW: 69048 Da PI: 8.6862

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77	1.9e-24	241	285	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_022131277.1 241 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 285 79****************************************985 PP
2	QLQ	61.5	2.2e-21	172	207	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k XP_022131277.1 172 PFTPSQWMELEQQALIYKYITANVPVPSNLLIPIRK 207 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MEFGVVGLDG VVVGSDDTSG FSSLAAAAAS DPEAKQKWYE SASASAGFLH KQGRSATTAA 60 EDDDLRSSKL ARISDDLSSS SSSSKGMLFP QRQAAASFLR SNSAYFVSDS GSNQHHQMLC 120 FASPNPKSEA FSLDKPSLSG ASPNFSRNTG YSYGNLNGGG MHGGAFIGVR APFTPSQWME 180 LEQQALIYKY ITANVPVPSN LLIPIRKALE SAGFSAFSGG FLRPTAVGWG SFNVGFSNNT 240 DPEPGRCRRT DGKKWRCSRD AVADQKYCER HMNRGRHRSR KPVEGQSGHS VAGASNITTA 300 TNSSKLPSAS SMAVPGNGSS NSLSFVNQNF KNLHRAGAGS QPTPSAATAQ INRMFIMNKE 360 NGGNGLHDTT TSSGLSVLSP AIDMKSKPQL PFAMQKQQNP FEEPSRTEFG LLSSSFLLNS 420 SQKTSSLMTY RTFNPSEGIT TQEAVDQSQH SLRQFFNNWP KNQSDTSSVS WSNSNLDLQS 480 DRTQLSISIP MATSDFRSST SSPANEKVTL SPLKSSQEVD PIQMGLGVGN VMDEPNNRQA 540 NWIPISWESS MGGPLGEVLH STNNNGGELK SSSILNLMTE GWDNSPSLGS SPTGVLQKTA 600 FGSFSNSSTG SSPRTENNKT HEGGGGGSSH CSDRLGSTFV NSSKSLPSV

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MEFGVVGLDG VVVGSDDTSG FSSLAAAAAS DPEAKQKWYE SASASAGFLH KQGRSATTAA  60
EDDDLRSSKL ARISDDLSSS SSSSKGMLFP QRQAAASFLR SNSAYFVSDS GSNQHHQMLC  120
FASPNPKSEA FSLDKPSLSG ASPNFSRNTG YSYGNLNGGG MHGGAFIGVR APFTPSQWME  180
LEQQALIYKY ITANVPVPSN LLIPIRKALE SAGFSAFSGG FLRPTAVGWG SFNVGFSNNT  240
DPEPGRCRRT DGKKWRCSRD AVADQKYCER HMNRGRHRSR KPVEGQSGHS VAGASNITTA  300
TNSSKLPSAS SMAVPGNGSS NSLSFVNQNF KNLHRAGAGS QPTPSAATAQ INRMFIMNKE  360
NGGNGLHDTT TSSGLSVLSP AIDMKSKPQL PFAMQKQQNP FEEPSRTEFG LLSSSFLLNS  420
SQKTSSLMTY RTFNPSEGIT TQEAVDQSQH SLRQFFNNWP KNQSDTSSVS WSNSNLDLQS  480
DRTQLSISIP MATSDFRSST SSPANEKVTL SPLKSSQEVD PIQMGLGVGN VMDEPNNRQA  540
NWIPISWESS MGGPLGEVLH STNNNGGELK SSSILNLMTE GWDNSPSLGS SPTGVLQKTA  600
FGSFSNSSTG SSPRTENNKT HEGGGGGSSH CSDRLGSTFV NSSKSLPSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-85	GRF family protein