PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131289.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 332aa    MW: 37317.1 Da    PI: 4.551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.5e-12170213654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A+eY+k+L
  XP_022131289.1 170 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIEYMKEL 213
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MELDEHVFME ELLALRREAN WDAIPTEISD LCSTAWSFDY CFDQSTANFH QNSSSEALSA  60
QNLDEFYHPL ASEFSVPQVA DSAYAAMEVA APLPFQADRP SAEREGEGEV EEEELGFLAD  120
EIQNMEVQVQ SACKMEPNLS PEIPVFNIGT CSLERKNRPK KLQGQPSKNL MAERRRRKRL  180
NDRLSMLRSI VPKISKMDRT AILADAIEYM KELLEKIGNL QREVDRSNQT NSFNDTKPSE  240
FVVRNSPKFE VESGNGSTRI EICCAAKPGL LLSTVNTIEA LGLEIQQCVI SCFNDFALQA  300
TCSEELKQKA ERKPGELKEA LFRNAGYGGR CL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173180ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.19e-75bHLH family protein