PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131345.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TALE

Protein Properties

Length: 538aa MW: 59986.2 Da PI: 6.239

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.8	1.8e-08	460	498	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_022131345.1 460 MFQNflHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVR 498 5887779******************************88 PP
2	BELL	60	5.7e-20	336	399	6	70
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70 +k+++Ll+ll+ +d+rY q+ ++++tv+s+F+a+++l++ +++t+ l+ i+ +r+L+++i++ XP_022131345.1 336 DAKRSHLLTLLQLIDERYTQCLDEIHTVASAFHAATDLDP-RLHTRYTLQSITSVYRNLREKITN 399 579***********************************.********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MTSANSVIVA GFPILLTLRE SGCSALATTD NHIVNQLESP MPTALQQIVV GDASQGCLSS 60 SGNTEFQDQL AGTIPITSLF QSTSLSPVNV IRGNTKDSAF SDSQFQPLET FRTCILHSSS 120 NASNSSFATS SLNCEGDESL CNANNKWESH RFHYIQQHTG ENQERLDFQT ISSIENLDLN 180 GWMPSNTMNS KLWNELSLSL ATSQPVVIEG TNCLDQYPQL AFSGATQACL NSTELGSNLN 240 SCNSMDLSLS YGSGSPIHLS QAIVGSSYLS VIQDILSQIA SYSLENSDQV SYSTTTAGFV 300 PFSSRSLDDA TSEFGSDVIG ISSSQMELQW QKLSGDAKRS HLLTLLQLID ERYTQCLDEI 360 HTVASAFHAA TDLDPRLHTR YTLQSITSVY RNLREKITNC IFTMGVSSNT MCTVEKEKSF 420 EATFIQKQWA LQQLKRKDNQ LWRPQRGLPE RSVSVLRAWM FQNFLHPYPK DTEKHLLAVK 480 SGLTRNQVSN WFINARVRLW KPMIEEMYAE ISRRKSSQND EGFERIRRSQ ISMGRKKM

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MTSANSVIVA GFPILLTLRE SGCSALATTD NHIVNQLESP MPTALQQIVV GDASQGCLSS  60
SGNTEFQDQL AGTIPITSLF QSTSLSPVNV IRGNTKDSAF SDSQFQPLET FRTCILHSSS  120
NASNSSFATS SLNCEGDESL CNANNKWESH RFHYIQQHTG ENQERLDFQT ISSIENLDLN  180
GWMPSNTMNS KLWNELSLSL ATSQPVVIEG TNCLDQYPQL AFSGATQACL NSTELGSNLN  240
SCNSMDLSLS YGSGSPIHLS QAIVGSSYLS VIQDILSQIA SYSLENSDQV SYSTTTAGFV  300
PFSSRSLDDA TSEFGSDVIG ISSSQMELQW QKLSGDAKRS HLLTLLQLID ERYTQCLDEI  360
HTVASAFHAA TDLDPRLHTR YTLQSITSVY RNLREKITNC IFTMGVSSNT MCTVEKEKSF  420
EATFIQKQWA LQQLKRKDNQ LWRPQRGLPE RSVSVLRAWM FQNFLHPYPK DTEKHLLAVK  480
SGLTRNQVSN WFINARVRLW KPMIEEMYAE ISRRKSSQND EGFERIRRSQ ISMGRKKM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	525	537	RIRRSQISMGRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	2e-98	TALE family protein