PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131415.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 553aa MW: 63002.2 Da PI: 5.4262

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.1	2.2e-24	197	250	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022131415.1 197 KARVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 250 68*****************.9*****************************8 PP
2	Myb_DNA-binding	38.6	2.5e-12	199	249	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_022131415.1 199 RVVWSVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 249 678***********************************************7 PP
3	Response_reg	83.4	6.8e-28	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_022131415.1 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCCLAREALNLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 111 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_022131415.1 112 ACDYLLKPIRMKELRN 127 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MENGFSSPRC DAFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALNLLRERK 60 DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVLRKKIQEG RDIEGHDIIE GIHILRNGSD RYDDSQFLRG EELFSVRKRK 180 DVDKHDDKDF GDTSTKKARV VWSVDLHQKF VKAVNQIGFD KVGPKKILDL MNVPWLTREN 240 VASHLQKYRL YLSRLQKEND PKACFVVGMK HTDSSSKDGD GNFGLRSSLV VQQNDVTNSS 300 FSFSGDNFLL QNVDSIGCEV DRKRIVQEHT SEPKRPAARS VPEPIKTRST QMKFNNSFES 360 EGKFAAFDPN NRTCYPWVEA PEIQFKQESK PLVHLERDFS QFPPKVSPHQ VQIDQLQSIS 420 SISSGRSATE KDIASSIESK SKSFNGMNDQ FKPISTTTTP LGMTDQNFNL SCNSDLGSGL 480 PKTTFDEDLQ IYLLQDVCYP KNLEDQIIEF PDYGDPGIFT DVPPHLYDAL RYGYEYSYDP 540 TEYPVIDEGL FIA

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MENGFSSPRC DAFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALNLLRERK  60
DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVLRKKIQEG RDIEGHDIIE GIHILRNGSD RYDDSQFLRG EELFSVRKRK  180
DVDKHDDKDF GDTSTKKARV VWSVDLHQKF VKAVNQIGFD KVGPKKILDL MNVPWLTREN  240
VASHLQKYRL YLSRLQKEND PKACFVVGMK HTDSSSKDGD GNFGLRSSLV VQQNDVTNSS  300
FSFSGDNFLL QNVDSIGCEV DRKRIVQEHT SEPKRPAARS VPEPIKTRST QMKFNNSFES  360
EGKFAAFDPN NRTCYPWVEA PEIQFKQESK PLVHLERDFS QFPPKVSPHQ VQIDQLQSIS  420
SISSGRSATE KDIASSIESK SKSFNGMNDQ FKPISTTTTP LGMTDQNFNL SCNSDLGSGL  480
PKTTFDEDLQ IYLLQDVCYP KNLEDQIIEF PDYGDPGIFT DVPPHLYDAL RYGYEYSYDP  540
TEYPVIDEGL FIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-126	ARR-B family protein