PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131428.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 265aa    MW: 29095.1 Da    PI: 10.8282
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-1382126347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+  ++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky
   XP_022131428.1  82 PWSEEEHRVFLVGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKY 126
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGRKCSHCGK VGHNSRTCTI RGRFKLFGVQ LDGAAMKKSF SLDCLPSSSS TSSTSSSDIK  60
LATGYLSDGL ITKTHERKKG VPWSEEEHRV FLVGLEKLGK GDWRGISRKF VTTRTPTQVA  120
SHAQKYFLRL TTLTRKKHCR PSLFDGGARD KFTMQVVESS NSNSKPTSNL PASPSNISFG  180
IPSKNSTPIN IPKMTLNHHH HHHNSSVPIW FGYEPSKNSS SIVNYHSHGK KKTISHHQAP  240
DLQLSLSTPK PVQLPAAING AISVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.15e-57MYB_related family protein