PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131640.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 219aa    MW: 24326.4 Da    PI: 4.4665
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-191464155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+ykGVr++k +g+Wv+eIr p++   r r++lg+++++e+Aa+a +aa  +l+g
  XP_022131640.1 14 SKYKGVRRRK-WGKWVSEIRLPNS---RDRIWLGSYDSPEKAARAFDAALYCLRG 64
                    89*****998.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNTPPSAAEA AGESKYKGVR RRKWGKWVSE IRLPNSRDRI WLGSYDSPEK AARAFDAALY  60
CLRGRHAKFN FPDQPPDILD AHSLTCQQIQ EVAAKFANEY SNDAVIVAPP ADDHAAAADD  120
SSPVATVDQI CHVGASSVKD ENYNMDWSNF LNKLDPVDQG GGSGSASNLF NIYSDQFDNM  180
ITDELYQTHD PHDDGDYYDD VSGHDSFSHQ SFLWNFGNN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-45ERF family protein