PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131905.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 624aa MW: 66081.1 Da PI: 8.2811

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.9	2.2e-08	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l+ avk+ G g+W+ I r + Rt+ q+ rw XP_022131905.1 199 RKPWSEAEDLELIAAVKKCGEGNWANILRgdFLS-DRTASQLSQRW 243 789************************9822354.77777777777 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MKLKKRSVSE KDISNLLQRY SPTTVLALLQ EVGQVSEAKI DWNELVKNTS TGICNAREYQ 60 MLWRHLAYRH ALLDNLDDEK APLEDDSDLE CDLEPFPSVS CEALSEAAAC AKVFISSGSP 120 SDLNVPSSST IEAPLTINLP RSYTSGVQLE SVDPAGFIKG AAITVPVSVQ RQPVLTPSSA 180 EGLNGNGSSY GNNASRRKRK PWSEAEDLEL IAAVKKCGEG NWANILRGDF LSDRTASQLS 240 QRWAIIKKRH GNLNVGPNTA GTQLSEVQLA ARHAMSLALD KHVGSLKAAR ISGSAGTNTL 300 GNGSSLAAVA TSEQLQEKLH QSSTPTKPSS IGPSSLTAKA QVTATKKMIT KSSFDSDSIV 360 RAAAVAAGAR IASPADAASL LKAAQSKNAI HIMAKVPASS KTPTPGRGPN HLEPHPSIKT 420 PILSNNPTVM PGVSRGGPIK TISPTTAMVS SVPTDQNIAV ASATAAGPLS EKEIKTVEEI 480 RGRGLGDVQA TSQKDEDCLS RRSISERVKE EKPADVGPPL KKQATETSNR SSSLNIPRAD 540 GDIKVETGSQ VEERQNSNTN TVPGSSDEQV SMNQSQVERS KPQDMDVDGN GKDRPAMKTD 600 GCSKNLGHKE AANEILEGNS TVKS

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MKLKKRSVSE KDISNLLQRY SPTTVLALLQ EVGQVSEAKI DWNELVKNTS TGICNAREYQ  60
MLWRHLAYRH ALLDNLDDEK APLEDDSDLE CDLEPFPSVS CEALSEAAAC AKVFISSGSP  120
SDLNVPSSST IEAPLTINLP RSYTSGVQLE SVDPAGFIKG AAITVPVSVQ RQPVLTPSSA  180
EGLNGNGSSY GNNASRRKRK PWSEAEDLEL IAAVKKCGEG NWANILRGDF LSDRTASQLS  240
QRWAIIKKRH GNLNVGPNTA GTQLSEVQLA ARHAMSLALD KHVGSLKAAR ISGSAGTNTL  300
GNGSSLAAVA TSEQLQEKLH QSSTPTKPSS IGPSSLTAKA QVTATKKMIT KSSFDSDSIV  360
RAAAVAAGAR IASPADAASL LKAAQSKNAI HIMAKVPASS KTPTPGRGPN HLEPHPSIKT  420
PILSNNPTVM PGVSRGGPIK TISPTTAMVS SVPTDQNIAV ASATAAGPLS EKEIKTVEEI  480
RGRGLGDVQA TSQKDEDCLS RRSISERVKE EKPADVGPPL KKQATETSNR SSSLNIPRAD  540
GDIKVETGSQ VEERQNSNTN TVPGSSDEQV SMNQSQVERS KPQDMDVDGN GKDRPAMKTD  600
GCSKNLGHKE AANEILEGNS TVKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-67	MYB_related family protein