PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131965.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 25362.1 Da    PI: 7.8781
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.51.3e-26959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKAeEL vLCda+va++ifs tgkl+eyss
  XP_022131965.1  9 KKIDNLTARQVTFSKRRRGLMKKAEELAVLCDADVALLIFSATGKLFEYSS 59
                    68***********************************************96 PP
2K-box42.72.5e-15981702698
           K-box  26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     k +    +++R++ GedL+ L+l++L+qLe+ Le +l ++  +K++ ++++i+ l  k  +l een++L++k+
  XP_022131965.1  98 KDVADKSHQLRQMRGEDLQGLNLEDLKQLERVLEVGLARVLHTKEQKIMSEISALELKGARLMEENRKLKQKM 170
                     5555556789*************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAREKIKIKK IDNLTARQVT FSKRRRGLMK KAEELAVLCD ADVALLIFSA TGKLFEYSSS  60
SIKDVIGRYN LHSNNIGKLE YPSLELQLEN SNHVRLCKDV ADKSHQLRQM RGEDLQGLNL  120
EDLKQLERVL EVGLARVLHT KEQKIMSEIS ALELKGARLM EENRKLKQKM LRLSNERIPV  180
LADSDVGIPE EGGVSSESAA NVCSCNSGPP ADEDSSDTSL KLGLPCSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-83MIKC_MADS family protein