PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131973.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 28254.8 Da PI: 6.7317

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.8	4.6e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gklye+ss XP_022131973.1 9 KKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIIFSTRGKLYEFSS 59 68***********************************************96 PP
2	K-box	92.7	6.2e-31	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++++++qe+ kLk+e+e+Lq++qR++lGe+L++L+ keL qLe qLe slk+iRs K++ +++q+++lqkke+ l e+n+aLr+klee XP_022131973.1 82 HHPKDTQRWYQEYLKLKAEVESLQHSQRRFLGEELDDLETKELDQLEIQLEMSLKQIRSAKSQTMFDQLSDLQKKEELLLETNQALRRKLEE 173 456789***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKK IENKINRQVT FTKRRNGLLK KAYELSILCD AEVALIIFST RGKLYEFSSS 60 SSIAKTLERY QRHSYGALEP SHHPKDTQRW YQEYLKLKAE VESLQHSQRR FLGEELDDLE 120 TKELDQLEIQ LEMSLKQIRS AKSQTMFDQL SDLQKKEELL LETNQALRRK LEESNAALHW 180 TWEASDQHSL QYSRQAEGFL QRNNIVALEN SYHPAEVSNQ ENGINSGPEP EAASGFPSHW 240 MML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03710.1	5e-77	MIKC_MADS family protein