PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131976.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 252aa    MW: 28105.4 Da    PI: 8.5703
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131976.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.85.4e-1554100354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r+h+e+ErrRR+riNs +++Lr+llP+      +K +Ka+ L ++v ++k+L
  XP_022131976.1  54 RSHKEAERRRRQRINSHLSTLRTLLPNT-----TKTDKASLLAEVVSHVKEL 100
                     78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MLPFQSHYGL QTSNWSNYCN GDRVKRSVFA GECSIVNNAA DSSKEERKST EASRSHKEAE  60
RRRRQRINSH LSTLRTLLPN TTKTDKASLL AEVVSHVKEL RRRAAEVARR STADQCGGGG  120
IRSETEPAPW PFPSEEDEAT LCYCDNENRV MRATVCCDER SGLNRDLMQA IRSVQARAVR  180
AETMTVGGRT KNVVVLEWCG GDGGGGGSRE EEFVGLRRAL KAVVENQAQN LSSNKRARSW  240
ASCPEEDRFF MC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.12e-30bHLH family protein