PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132086.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 221aa    MW: 24190.6 Da    PI: 7.7296
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260111.27.4e-3534132199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     aCaaCk++rrkC++dC+lapyfpa++pk+f+nv++lFG++nvlk+l+++++++r +a++++++eA++ra+d   G++++i +lq+++  l+a+ +
  XP_022132086.1  34 ACAACKFQRRKCSPDCPLAPYFPADRPKNFQNVRRLFGVKNVLKTLRDVEPSNRAAAAECMIFEANCRADDLAGGCYKIIAELQSEITFLEAQQN 128
                     7******************************************************************************************9988 PP

          DUF260  96 llke 99 
                     l+ +
  XP_022132086.1 129 LVLR 132
                     7755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MKNIAENCGQ IAEDGWPIQH SPTETAAAAA AAQACAACKF QRRKCSPDCP LAPYFPADRP  60
KNFQNVRRLF GVKNVLKTLR DVEPSNRAAA AECMIFEANC RADDLAGGCY KIIAELQSEI  120
TFLEAQQNLV LRQLCIFRET AAVAMDPMSS SYGGAVHPQL IHGFNFDSKP CFSSLLLDCG  180
GTTTIDLGNC EDRFRKEFCN LKGGGRRIKE ENGASLSCRS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.13e-30LBD family protein