PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132107.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 366aa    MW: 40195.7 Da    PI: 5.8919
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA565.5e-18255289135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022132107.1 255 CMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 289
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MELPDYFQIN NAAYCSSQFV AETRHSSSDN DTDGGCGGEH FIVEELLDFS NDDGVAADVS  60
SFNGNDNNNP SVSVSVIESC NSSNSFSCCE PNSFLDDITH SNLGDAKFST ELCVPYDDLA  120
ELEWLSNFVE ESFSSEDMQK LELISGVKVK SDETFQIRQP SPAVAVAAAE IFKPDIVSVP  180
AKARSKRSRA AVPTNWNNSR LLPLSPTTSS SELDVLAVAA TPPHPGKKAT IKATVTAKKK  240
DCPDAGASPG EGRKCMHCAT DKTPQWRTGP MGPKTLCNAC GVRYKSGRLV PEYRPAASPT  300
FVLTKHSNSH RKVLELRRQK ELQRTQQQQH QHQLILDHHQ NMIFDASNGD DYLIHQHVGP  360
DFRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.15e-65GATA family protein