PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132171.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YC
Protein Properties Length: 140aa    MW: 15654.9 Da    PI: 9.2725
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC50.25.6e-169911697
           NF-YC 16 fknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                      + e+P  r+kki+k+d+dv ++ +ea  l+s a +lf+  l+ +s   a e+kr+t+k   i  av+r   i dfl+d  p
  XP_022132171.1  9 AIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRpISDFLLDSLP 91
                    556789**************************************************************9975489*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MAEEESGEAI RPEIPTGRVK KIMKVDKDVC KVNSEALFLV SCATDLFLKL LAEKSAEVAT  60
EKKRKTVKLE HIRIAVKRHR PISDFLLDSL PLPPQPSDAP AKNENRTRTA ADKAAPEGTR  120
RIDDFFRKPA KTTSDENNES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.13e-38NF-YC family protein