PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132203.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 372aa MW: 42303.4 Da PI: 4.8537

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.1	1.6e-34	47	138	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++e++ed+ +++++sws+ nsf+v+d+++f++++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F g+++ll++ XP_022132203.1 47 FLTKTFEMVEDPFTDSIVSWSKARNSFIVWDSHKFSSTLLPRYFKHRNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLGGQRNLLKT 132 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_022132203.1 133 IKRRRH 138 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDKLKVKVEE PMAAGTAAGA SSSSSSSSSS ITPQPIDGLH DVGPPPFLTK TFEMVEDPFT 60 DSIVSWSKAR NSFIVWDSHK FSSTLLPRYF KHRNFSSFVR QLNTYGFRKV DPDRWEFANE 120 GFLGGQRNLL KTIKRRRHAS QSFHHQGGTC VELGQFGLKG ELERLRRDRS SLMAELVRLR 180 QQHQSSREQV TAMEDRLQNA ERKQKQIMTF LSKALKNPSF IQKFIHSNQR RELRGIEIGR 240 KRRLTASPSV ENLQEENVLV AVRQEEVETL EPDIETLLTV NLEDESSSEV KDPVSDGIPM 300 AAMDLGHYAP EELWDELWTE DLVAGYPEEE AIIVGDQSEA DVEVEDLIAE PPDWTEDLQE 360 LVDQMGFLRS TP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDKLKVKVEE PMAAGTAAGA SSSSSSSSSS ITPQPIDGLH DVGPPPFLTK TFEMVEDPFT  60
DSIVSWSKAR NSFIVWDSHK FSSTLLPRYF KHRNFSSFVR QLNTYGFRKV DPDRWEFANE  120
GFLGGQRNLL KTIKRRRHAS QSFHHQGGTC VELGQFGLKG ELERLRRDRS SLMAELVRLR  180
QQHQSSREQV TAMEDRLQNA ERKQKQIMTF LSKALKNPSF IQKFIHSNQR RELRGIEIGR  240
KRRLTASPSV ENLQEENVLV AVRQEEVETL EPDIETLLTV NLEDESSSEV KDPVSDGIPM  300
AAMDLGHYAP EELWDELWTE DLVAGYPEEE AIIVGDQSEA DVEVEDLIAE PPDWTEDLQE  360
LVDQMGFLRS TP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	LKTIKRR
2	164	169	RLRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-116	HSF family protein