PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132347.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

YABBY

Protein Properties

Length: 183aa MW: 20363.3 Da PI: 5.9235

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	185.1	3.6e-57	6	170	2	167
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 d+ +sse++ yvqC+ C+til+v+vP++ l++vv vrCG Ct llsvn+a+ s ll++ l+++l ++l+ + ++ +n++s ++++++ XP_022132347.1 6 DLLDSSEEIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAMPSfipfDLLTS---LSHNLPKQLAFGQDFDLNNVTSDLIASNHN 97 56789*******************************************998544444454...455777778888888888888888877776 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkih 167 + + + ++p +p v++PPek+qr+Psayn+fikeei+r+ka+nP ++h+eaf +aaknWah+P++h XP_022132347.1 98 IIQDHED--DPDLIINIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPAH 170 6555442..4566778888899**************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MSTVEDLLDS SEEIRYVQCG LCSTILLVNV PYSNLSMVVS VRCGNCTGLL SVNMAMPSFI 60 PFDLLTSLSH NLPKQLAFGQ DFDLNNVTSD LIASNHNIIQ DHEDDPDLII NIPPTPVVNK 120 PPEKKQRAPS AYNQFIKEEI RRLKAENPAM AHKEAFKTAA KNWAHLPPAH GEEGDQMRKK 180 IVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-52	YABBY family protein