PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132360.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 327aa    MW: 37162.9 Da    PI: 4.6048
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65.2e-1958111356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  XP_022132360.1  58 KKRRLSVDQVKALEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 111
                     456899***********************************************9 PP
2HD-ZIP_I/II129.81.1e-4157149193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy  Lk++y++lk++ ++L++++++L++e+ke
  XP_022132360.1  57 EKKRRLSVDQVKALEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQQDNDALHKEIKE 149
                     69**************************************************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MKRHGSSDSL GALMSVCPTS EEQSPRNNHV YGREFQSMLL EGLDEEGSIE EHCHVGEKKR  60
RLSVDQVKAL EKTFEIENKL EPERKVKLAQ ELGLQPRQVA VWFQNRRARW KTKQLERDYG  120
LLKANYETLK RSFDTLQQDN DALHKEIKEL KSKLEEEKTE SNLSVKEEMF VSESDNLLIE  180
QTNNHLAMDH ISLPVASDHS DEFNYEGFKA AAVADDGNDQ RVEVSLFPDF KDGSSDSDSS  240
AILNEDNSPN GVVSSAGGML QSHPQFLSSP SSSLNCFPFQ KGYNNSNNAQ QFVKIEEHNF  300
FSGEETCNLF SDEQAPSMPW YCPDQWN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15887KKRRLSVDQVKALEKTFEIENKLEPERKVK
2106114RRARWKTKQ
3127132ETLKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-68HD-ZIP family protein