PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132500.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 510aa MW: 53806.5 Da PI: 8.8095

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022132500.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	11.2	0.0012	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022132500.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MPADLDNSSP ASGEASVSST GNGAPPPKSA AKKKRNLPGM PDPDAEVIAL SPKTLMATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVKKK VYVCPEPSCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRKDSFIT 180 HRAFCDALAE ESAKAQPQLV EKSASDSDPK GQSQKAVKPN PEPSPPPPPP SPPAASSPPQ 240 STCVLPTVLP IQSQDQPENL LQYNEEAPAT MGMSGSCSSS KSPSSNSSSS SRFASLFTSS 300 TTSLSLQPPQ PPAFTDLIHA MACSDRSSDY APTSTTEPIS LCLSSSHGAS IFGAATQELR 360 QYTPAPQPAM SATALLQKAA QIGAAASNAS LLRGLGLVPS SSSAAQQERL QWNKRQVEAD 420 GISIAAGLGL GLPCDGNSGL KELMRGNNSI FAPKHTTLDF LGLGMAAGGS PNSSLAALIT 480 SIGGSVDVTT TTTGSYGAGD ISGKDMNRNN

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MPADLDNSSP ASGEASVSST GNGAPPPKSA AKKKRNLPGM PDPDAEVIAL SPKTLMATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVKKK VYVCPEPSCV HHDPSRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRKDSFIT  180
HRAFCDALAE ESAKAQPQLV EKSASDSDPK GQSQKAVKPN PEPSPPPPPP SPPAASSPPQ  240
STCVLPTVLP IQSQDQPENL LQYNEEAPAT MGMSGSCSSS KSPSSNSSSS SRFASLFTSS  300
TTSLSLQPPQ PPAFTDLIHA MACSDRSSDY APTSTTEPIS LCLSSSHGAS IFGAATQELR  360
QYTPAPQPAM SATALLQKAA QIGAAASNAS LLRGLGLVPS SSSAAQQERL QWNKRQVEAD  420
GISIAAGLGL GLPCDGNSGL KELMRGNNSI FAPKHTTLDF LGLGMAAGGS PNSSLAALIT  480
SIGGSVDVTT TTTGSYGAGD ISGKDMNRNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-131	C2H2 family protein