PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132501.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 494aa MW: 52618.3 Da PI: 8.6376

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022132501.1 49 FVCEICNKGFQRDQNLQLHRRGH 71 89*******************88 PP
2	zf-C2H2	10.8	0.0016	126	147	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k + +s+ k H + + XP_022132501.1 126 ECDKCSKKYAVQSDWKAHSKIC 147 7*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MPADVEVDDS SSPEAKSSTK KKRNLPGMPD PEAEVIALSP KTLLATNRFV CEICNKGFQR 60 DQNLQLHRRG HNLPWKLRQR SSNEVKKKVY VCPEPSCVHH DPSRALGDLT GIKKHFCRKH 120 GEKKWECDKC SKKYAVQSDW KAHSKICGTR EYKCDCGTLF SRRDSFITHR AFCDALAGER 180 AKAQPQTVDK SDLDSGSKAA KTVVARPNPE PSPPPPPSPP ATSPPQSSCE LTTSVLPVPS 240 QELLENPPQC IEEAPATTGI SGIGSSSKSS SSNSSTISGG FAGLFSSSST SISFQPPRHR 300 PAFTDLMQAM ACSDRSSEHA PSPSIEPISL CLAMNQGPPM FGTTSQDLRR FTPTPQPAIS 360 ATALLQKAAQ MGSAASNASL LRGLGLVSSS SVTAQQESSP WNQHRQVEPD GISIAAGLGL 420 GLPCDGNSGL KELMRGNRSM FAPKHTTLDF LGLGMAASGS PSSGLAALIT SVSSSVDVAT 480 ATRDIPSKDL NRSN

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MPADVEVDDS SSPEAKSSTK KKRNLPGMPD PEAEVIALSP KTLLATNRFV CEICNKGFQR  60
DQNLQLHRRG HNLPWKLRQR SSNEVKKKVY VCPEPSCVHH DPSRALGDLT GIKKHFCRKH  120
GEKKWECDKC SKKYAVQSDW KAHSKICGTR EYKCDCGTLF SRRDSFITHR AFCDALAGER  180
AKAQPQTVDK SDLDSGSKAA KTVVARPNPE PSPPPPPSPP ATSPPQSSCE LTTSVLPVPS  240
QELLENPPQC IEEAPATTGI SGIGSSSKSS SSNSSTISGG FAGLFSSSST SISFQPPRHR  300
PAFTDLMQAM ACSDRSSEHA PSPSIEPISL CLAMNQGPPM FGTTSQDLRR FTPTPQPAIS  360
ATALLQKAAQ MGSAASNASL LRGLGLVSSS SVTAQQESSP WNQHRQVEPD GISIAAGLGL  420
GLPCDGNSGL KELMRGNRSM FAPKHTTLDF LGLGMAASGS PSSGLAALIT SVSSSVDVAT  480
ATRDIPSKDL NRSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-117	C2H2 family protein