PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132524.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TALE

Protein Properties

Length: 355aa MW: 39383.2 Da PI: 6.4182

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	283	317	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_022132524.1 283 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRH 317 569*****************************885 PP
2	ELK	41.1	3.6e-14	237	258	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ XP_022132524.1 237 ELKGQLLRKYSGYLGSLKQEFM 258 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEGPSGGGGS SSGMMNFGDQ NNNNGLCSSM MMMMPLMSSH GGDGACSSFL PLPPPPPPHN 60 YEPSPNNNTT NPISYFMENN NTNNNSNNEG ANNAASSSSS SQVKAKIMAH PHYHRLLAAY 120 VNCRKVGAPP EVVARLEQAC ASAATISGTS SCIGEDPALD QFMEAYCEML TKYEQELSKP 180 FRDAMLFLQR IDCQFKALSI SSSSDAACGE AFDRNGSSEE EVDINGHSID PQAEDRELKG 240 QLLRKYSGYL GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES QKLALAQSTG 300 LDQKQINNWF INQRKRHWKP SEDMQFVVMD AAHPQYYMDT VLGNPFPLDI SPTLL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEGPSGGGGS SSGMMNFGDQ NNNNGLCSSM MMMMPLMSSH GGDGACSSFL PLPPPPPPHN  60
YEPSPNNNTT NPISYFMENN NTNNNSNNEG ANNAASSSSS SQVKAKIMAH PHYHRLLAAY  120
VNCRKVGAPP EVVARLEQAC ASAATISGTS SCIGEDPALD QFMEAYCEML TKYEQELSKP  180
FRDAMLFLQR IDCQFKALSI SSSSDAACGE AFDRNGSSEE EVDINGHSID PQAEDRELKG  240
QLLRKYSGYL GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES QKLALAQSTG  300
LDQKQINNWF INQRKRHWKP SEDMQFVVMD AAHPQYYMDT VLGNPFPLDI SPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	262	LKQEFMKKRK
2	259	263	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-136	TALE family protein