PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132525.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 225aa    MW: 25779.5 Da    PI: 4.7625
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS204.94.8e-638225156374
            GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns 250
                     ++l +tg+rLa+fA+ l+++fef++ + + +e+l+ +++r++ +E laVn++lql++llde+        +vL+l ksl+P++v++ e ea++n+
  XP_022132525.1   8 TSLFATGNRLAEFAKLLELNFEFEP-ILTPIEELSESSFRIDDDEILAVNFMLQLYNLLDETPRAVL---NVLQLAKSLNPRIVTLGEYEASLNR 98 
                     67789********************.799******************************99998888...9************************ PP

            GRAS 251 esFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                       F++rf +al+yysa+f+sle kl+r+s+er  +E+++lgr+i  vv  e  + ++er+e +e+W+  +e++GF+pv+ls++a +qa+ ll ++
  XP_022132525.1  99 VGFFNRFKNALRYYSAVFESLEPKLARDSNERLQLEKVVLGRQIAGVVGPESPRtKTERMEDKEQWKILMENCGFEPVNLSHYARSQARILLWNY 193
                     **************************************************998779*************************************** PP

            GRAS 345 k.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                     + s  y++ e+s  ++ l W++ p+++vS+Wr
  XP_022132525.1 194 DySSLYSLIESSPGFLsLAWSEVPIITVSSWR 225
                     *9999**9999888888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MLGKCPATSL FATGNRLAEF AKLLELNFEF EPILTPIEEL SESSFRIDDD EILAVNFMLQ  60
LYNLLDETPR AVLNVLQLAK SLNPRIVTLG EYEASLNRVG FFNRFKNALR YYSAVFESLE  120
PKLARDSNER LQLEKVVLGR QIAGVVGPES PRTKTERMED KEQWKILMEN CGFEPVNLSH  180
YARSQARILL WNYDYSSLYS LIESSPGFLS LAWSEVPIIT VSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-109GRAS family protein