PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132589.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 431aa    MW: 49569.6 Da    PI: 10.1039
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.44.7e-17897196
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                    ffk+ ++  +l+ +rl++p kf+ee+g+    s  ++l+ ++g++W+v l  + + ++ ++l++GW  F++  +Lk g ++v++ld++s+f     +
  XP_022132589.1  8 FFKIVMQ-RNLEDQRLMIPQKFVEEYGKF--LSSSVRLKLPDGKEWKVGL--KATTNGaVWLQNGWHPFAEHYRLKHGSMLVLRLDENSTF--QTLI 97
                    6676655.5666778***********855..7778***************..4444444**************************998888..5555 PP
2B355.88.2e-18207296190
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+ v+ +s+v+ + +l++pk+fae++  + e +  +++++++g++W + +++++++     ++++GWk F+++n Lk+gD+  F+l+++ +f
  XP_022132589.1 207 FKVVMGKSNVGGRFNLIIPKEFAEKYLAE-EFG-IIRVQNSNGKTWPLLYKWTRSRAYafSYISSGWKCFAEENLLKVGDVGFFQLIENGRF 296
                     66778899******************544.343.8***************98777665778899**********************987776 PP
3B354.71.8e-17324419199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 
                     ffkv ++  + +s  l +p  f ++h  + +++   ++  + g++W+v +  +++++ + +++GW +F ++n L++gD+++F+l  ++ s f ++
  XP_022132589.1 324 FFKVDIHFVSYRSTVLNIPMGFGKKHI-P-PGT-HTVMLKLGGKKWKVSM--KNYDRCFRFSAGWCSFYRDNALQDGDTCLFELLnKNhSHFVFK 413
                     6777777777888899*******9994.3.333.4666789*********..***999*************************65488899*999 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++frk
  XP_022132589.1 414 VTIFRK 419
                     999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MSSSSPHFFK IVMQRNLEDQ RLMIPQKFVE EYGKFLSSSV RLKLPDGKEW KVGLKATTNG  60
AVWLQNGWHP FAEHYRLKHG SMLVLRLDEN STFQTLIFEP SGSEIEYSFK FNDFGGDFQE  120
ESDDDSDESF EIFHQHSKKR EKPSLPSSQS RKKMRSEGSF SPKMVPQEGR HISREKPSCK  180
RMAQNGVSNR RQPLSSPAKK AEKKPGFKVV MGKSNVGGRF NLIIPKEFAE KYLAEEFGII  240
RVQNSNGKTW PLLYKWTRSR AYAFSYISSG WKCFAEENLL KVGDVGFFQL IENGRFLFTT  300
EETSPSTSPS LSPKKEAETA TNPFFKVDIH FVSYRSTVLN IPMGFGKKHI PPGTHTVMLK  360
LGGKKWKVSM KNYDRCFRFS AGWCSFYRDN ALQDGDTCLF ELLNKNHSHF VFKVTIFRKI  420
TASVENVLEI W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-21B3 family protein