PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132655.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 193aa    MW: 20654.3 Da    PI: 5.3469
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001885106223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC  Cgk F ++     H+r+H
  XP_022132655.1  85 KCATCGKIFGSWKAVFGHLRSH 106
                     7*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MERDHNNQDS SSDEHRGGGS DDVDGNTPPK TPTGGFEDVV VSSSPQETSG KKRGRAEEQA  60
GGSSSGGGKG KKKGELIDPP STDPKCATCG KIFGSWKAVF GHLRSHPERD YRGAFPPPKM  120
WEEMLRQEAV RRQHGQDQGS STTEMGTGTS SPSGRGIGID LNDPEKPHSP PDKGGFPFDL  180
NMPAPESDEE DHK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15056GKKRGRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35610.16e-14C2H2 family protein