PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132692.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 249aa MW: 27307.9 Da PI: 8.1162

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.8	3.8e-18	124	178	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q Lee F+ +++++ ++++ LA++l+L rqV vWFqNrRa+ k XP_022132692.1 124 RKKLRLTKQQSALLEESFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTK 178 788899***********************************************98 PP
2	HD-ZIP_I/II	123.8	8e-40	124	213	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q++lLEesF+ +++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eL+ +l XP_022132692.1 124 RKKLRLTKQQSALLEESFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTDENRRLQKELQELK-AL 213 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MGFDDLSNTG LLLGLGLTLP SKPSPPDNLS QTPKKSVALF TFSPSAANSE PSLTLGLSSD 60 AYLNLQAAAD AVDLCRQPSP HSAVSSFSSG GRVKRERDVS GEDIEEEKAS SRVSDEDEDG 120 SNARKKLRLT KQQSALLEES FKLHSTLNPK QKQALARELN LRPRQVEVWF QNRRARTKLK 180 QTEVDCEFLK RCCETLTDEN RRLQKELQEL KALKLAQPLF MQMPAATLTM CPSCERIGGG 240 VNGDGSSKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	181	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-77	HD-ZIP family protein