PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132700.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 444aa    MW: 50625.7 Da    PI: 9.2712
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.1e-1511102299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fk  ++  + + ++l++pkkf++++g+    s  + l+ ++g +W+v l+ + + g+++l++GW  F++   L+ g ++v++ldg+s+f  +  +
  XP_022132700.1  11 FKMVLQ-KSIEDKQLMIPKKFVRDYGKF--LSSSICLKLPDGMEWKVGLK-TATNGSVWLRNGWHTFAEHYCLEHGSMLVLRLDGKSTF--HTLI 99 
                     554444.4455567***********854..7778***************4.666667***************************98888..8888 PP

                     E-S CS
              B3  97 frk 99 
                     f++
  XP_022132700.1 100 FDA 102
                     876 PP
2B351.61.7e-16224314396
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      v+ +s v+ +  +++pk+fa+++  +k +   +++++++g sW++ ++++ ++g+  ++++GWk F+++n Lk gD+  F+++++++f  ++++
  XP_022132700.1 224 IVMGKSTVGGRFFMTIPKDFAQNYLPEKVG--RIRIQTLDGGSWSLLYKWSPSRGGfAYISRGWKXFAEENLLKKGDVGFFQMIEKDQF--LFTI 314
                     5677899999***********888434444..6*****************999999899***********************9987777..5555 PP
3B337.64e-123534341498
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                     +   +p  fa++h ++       +le    ++W+v++  +++ + + +t+GW  F  +n L++gD+++F+l  ++ s   ++v++f+
  XP_022132700.1 353 CVQNIPMGFAKKHISPVIH--SARLEV-GKKQWKVRM--KNYEKCIRFTSGWGIFYWENCLQDGDSCMFELLnKNdSHCAFKVTIFQ 434
                     555799****999444333..466555.67*******..9999999************************76344455556666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MASPPLPPHF FKMVLQKSIE DKQLMIPKKF VRDYGKFLSS SICLKLPDGM EWKVGLKTAT  60
NGSVWLRNGW HTFAEHYCLE HGSMLVLRLD GKSTFHTLIF DATGSEIEYS FDLKDFGGDF  120
QEESDDDSDE SLESFPQHSK KREKPSFPSS QSPKKMRNEG SFSPKMEPKT EPQEECYIFW  180
EKPSCKKISE DGVSRRQPLT SLTKKAEEPK RFSGSKSEKP GFRIVMGKST VGGRFFMTIP  240
KDFAQNYLPE KVGRIRIQTL DGGSWSLLYK WSPSRGGFAY ISRGWKXFAE ENLLKKGDVG  300
FFQMIEKDQF LFTIEETSAS ASASLSPKKT AATTRNPFFE VDVASIAINV RLCVQNIPMG  360
FAKKHISPVI HSARLEVGKK QWKVRMKNYE KCIRFTSGWG IFYWENCLQD GDSCMFELLN  420
KNDSHCAFKV TIFQKATSSL SESH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-21B3 family protein