PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132822.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ZF-HD
Protein Properties Length: 328aa    MW: 36792.3 Da    PI: 8.2724
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.56.5e-33124179460
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     vrY+eClkNhAas+Ggh++DGCgEfmp  ge+gt++alkCaAC+CHRnFHR+e+++e
  XP_022132822.1 124 VRYQECLKNHAASTGGHVLDGCGEFMPG-GEDGTPEALKCAACECHRNFHRKETKDE 179
                     89*************************9.999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAMRGEDEDI GTPSPLCYNA SSNRESSTKL PNSDPHLTTA DRRRDHTVPQ LHFPHHQNQN  60
HHKLSLHHYL HKHTRDHPEP TPDLLQTSAT ASPSAVTQPI AISRPISKAP LGAVASDNSV  120
PSLVRYQECL KNHAASTGGH VLDGCGEFMP GGEDGTPEAL KCAACECHRN FHRKETKDEH  180
TTHALPSGFF ISNSIRNNSH VTDRTPIPLS HHHQLPAVPI SSMMMAFGGS NGAPDESSSE  240
DLTMYHQCNN GSRDLFSQQP QLMKKRFRTK FTQGQKDKMV EFAEKLGWKI QKHDELEVQQ  300
FCAEVGVRRQ VFKVWMHNNK QAMKKKQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.11e-69ZF-HD family protein