PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132943.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 337aa    MW: 36805.6 Da    PI: 8.2783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000322412781254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + +++L +A+ YI+ L
  XP_022132943.1 241 RKEKLGDRISALQRLVAPF-----GKTDTSSVLSEAIGYIQFL 278
                     7778899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MESANLQRQL QELFVGYSSL VSAPRTAPIT HECSPNIILE GNSYNPYLGD QGLPCSRENE  60
NLWFNFSSNN YQQHNNEQQL STLYSSALQS PASASYGGFQ GMGAGSNTNY YSHVFSSSSR  120
NNSTTTSTLD LLSSSSFSSS MGYNLQAADH HMELLSAPNY CSAGFHKNGA LFGYGHQHHD  180
HHLQDSINNN SPSNSSNKTS SSSVARAKRP VNSLSVPKKS ISESKKSCST SRSSCPPLKV  240
RKEKLGDRIS ALQRLVAPFG KTDTSSVLSE AIGYIQFLHD QIETLSMPYL ASSQSKPYQK  300
LQSGSIQEDG TKPRLDLRSR GLCLMPLSCA SFIHGYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-36bHLH family protein