PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132962.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family DBB
Protein Properties Length: 167aa    MW: 18423.9 Da    PI: 6.0016
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box25.62.5e-08433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e+  ++lfC  ++  lC++C ++ H
  XP_022132962.1  4 LCDSCESAAATLFCAADEAALCAECDTKVH 33
                    6**************************998 PP
2zf-B_box27.46.8e-095292238
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                    e   C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  XP_022132962.1 52 EVSHCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrmHK 92
                    5678**************************99977677887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MRILCDSCES AAATLFCAAD EAALCAECDT KVHMCNKLAS RHVRVGLANP SEVSHCDICE  60
NAPAFFYCEV DGSSLCLQCD MIVHVGGKRM HKRYLLLRQG VEFPGDKMDN IKDLNAQVVE  120
QDETVRVQNE QPGEKQQNLR VSGVKDYSNG DGRSSSKRGN KVIDLNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-56DBB family protein