PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133093.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 347aa MW: 38690.4 Da PI: 5.4831

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.3e-12	170	216	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + K +Ka+iL Av+Y+k+Lq XP_022133093.1 170 EHVIAERKRREKLSQRFIALSALIPGL-----NKIDKASILGGAVRYVKELQ 216 599*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MESISSARWI SEWEMEETAF IDEIQIDPFE FSFDEFKFEQ SDGAGTVTAT AAEIYDYGPS 60 AVVEERPAKQ LKVAAADGAH CQIFAPTPKA DSSSSSSHII CFQSSNSKSS TVVEPKLEMD 120 FESDRNLNFS SLISESSWKE NNRYCWSRNG QGTKRAASGS MNRNPLHARE HVIAERKRRE 180 KLSQRFIALS ALIPGLNKID KASILGGAVR YVKELQERLK EAEERASKIS EEAATVYVKR 240 SSLSCSDDDV SSSEENTDSS GGPVPEIEAR VSNKDVLLRI HTHKRKGCLS YLHNKIENLN 300 LTILNSTALP FAHSQLHITI VAQMDIGFCM SMEDVVKNLR QALLEFI

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MESISSARWI SEWEMEETAF IDEIQIDPFE FSFDEFKFEQ SDGAGTVTAT AAEIYDYGPS  60
AVVEERPAKQ LKVAAADGAH CQIFAPTPKA DSSSSSSHII CFQSSNSKSS TVVEPKLEMD  120
FESDRNLNFS SLISESSWKE NNRYCWSRNG QGTKRAASGS MNRNPLHARE HVIAERKRRE  180
KLSQRFIALS ALIPGLNKID KASILGGAVR YVKELQERLK EAEERASKIS EEAATVYVKR  240
SSLSCSDDDV SSSEENTDSS GGPVPEIEAR VSNKDVLLRI HTHKRKGCLS YLHNKIENLN  300
LTILNSTALP FAHSQLHITI VAQMDIGFCM SMEDVVKNLR QALLEFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	180	ERKRRE
2	176	181	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	2e-48	bHLH family protein