PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133196.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27532.5 Da    PI: 9.1009
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.31.3e-251059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n+  rqvtfskRr+g+lKKA+EL +LCdae+ +iifss+gk ye++s
  XP_022133196.1 10 RIDNSASRQVTFSKRRKGLLKKAKELAILCDAEIGLIIFSSSGKHYEFAS 59
                    8***********************************************86 PP
2K-box74.52.9e-25831701198
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +++ + +q+e+a L++++ nL++++R+l+Ge+L  Ls+k+L++Le+qLe sl++iR kK+++l ++i+el +k   +++en +L+kk+
  XP_022133196.1  83 ASDLKLWQKEVAILRQQLLNLEENNRKLMGEQLYGLSVKDLNSLENQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQENIELSKKV 170
                     567789********************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGKIVIRR IDNSASRQVT FSKRRKGLLK KAKELAILCD AEIGLIIFSS SGKHYEFAST  60
SIESIIEKYN RRKEEDELLL NPASDLKLWQ KEVAILRQQL LNLEENNRKL MGEQLYGLSV  120
KDLNSLENQL EFSLQSIRIK KEQILNDEIK ELNRKGILMH QENIELSKKV NFFCQENMEL  180
HRKIYGHDSR DQMTVACENA LIPYGIISGT GVAXVPASSN ALRVPIHLEL SRPEQQNLIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.16e-80MIKC_MADS family protein