PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133209.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 245aa    MW: 27434 Da    PI: 8.9099
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.6e-13127172247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+ E++l++ + k++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_022133209.1 127 KPWTKKEHQLFLLGLKKFGKGDWRSISRNVVISRTPTQVASHAQKY 172
                      58*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEGPPSPSFR VSDDYWSPKT APSSPAPWTR HQDKIFEHAL VMVPENSPNR WLRIAGLIPG  60
KSPAEVSYHY DALVSDLLDI DSGRVELPSY AEDDSVASLP ETEAPPPNLS EKPSKSRPNE  120
TERKKGKPWT KKEHQLFLLG LKKFGKGDWR SISRNVVISR TPTQVASHAQ KYFLRQESAK  180
KDRKRSSIHD ITTVEGSLVA AAATDHCQLS TVPTIIQPPP PWPLLPHQFA SASYFPPDHR  240
SLLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-57MYB family protein