PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133222.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 254aa MW: 29181.8 Da PI: 6.6325

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.1	3.7e-45	5	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.vikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrF Pt+eelv++yL++k+++ + ++l + +i+ diy+++PwdLp+ ++ +e++w+fF++r+ ++a+g r++r+t+sgyWka XP_022133222.1 5 LPPGFRFYPTEEELVSFYLHHKLDAATtnhhlIKLMDqIIPLSDIYRFNPWDLPQfageVCRRDEEQWFFFVPRQDSEARGGRPKRVTSSGYWKA 99 79*******************99997777744444259999*******656754455788************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+ +v+s++++ +g+k+t+vfy+grapkg+kt+W m+ey++ XP_022133222.1 100 TGSPSQVYSSNHRSIGIKRTMVFYNGRAPKGTKTQWKMNEYKA 142 ***************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MADYLPPGFR FYPTEEELVS FYLHHKLDAA TTNHHLIKLM DQIIPLSDIY RFNPWDLPQF 60 AGEVCRRDEE QWFFFVPRQD SEARGGRPKR VTSSGYWKAT GSPSQVYSSN HRSIGIKRTM 120 VFYNGRAPKG TKTQWKMNEY KATPSPTTIP KLSLCRIYKK SKSLRAFDRR PLLQAAAEVE 180 TAEIAAEEPP AQHINVGDDD KLVDQKPNAP LMEEMGSSPE TGCSSEASKN NNTQLRMDVD 240 DDELVWDWNH LNWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.2	5e-69	NAC family protein