PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133300.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 208aa    MW: 23223.3 Da    PI: 6.6378
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08114155854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_022133300.1 114 AARLRRERISEKIRVLQRLVPGG-----TKMDTASMLDEAIRYVKFL 155
                     6799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEPPHLSNFT SHHLIQLSSM DDHRVHDLDL DSIWPASFLP LQPHDPRQQQ LPSPSSSTHL  60
LIGDDEEEPE EELGVMKEMM YKIAAMQPVD IDPSTIRKPK RRNVRISDDP QSIAARLRRE  120
RISEKIRVLQ RLVPGGTKMD TASMLDEAIR YVKFLKRQIR LLQVSQPQQP GTGGGAAAGG  180
WPFTFDKANG STSSSTSLEA PAITPSGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116121RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.17e-47bHLH family protein