PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133334.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

E2F/DP

Protein Properties

Length: 422aa MW: 47121.2 Da PI: 4.9562

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.3	8.4e-26	95	160	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_022133334.1 95 RYDSSLGLLTKKFINLIKQARDGILDLNNAAETL---KV--QKRRIYDITNVLEGIGLIEKKLKNIIYWKG 160 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MLSDRVSNPG PVHLGCLPHK LKQKGAMYHN MXESNDCIXD QGSSKDALSS IQTPVSAKGG 60 RVYKSKASRR TTSGPQTPIS DTSSFSSLTP AGSCRYDSSL GLLTKKFINL IKQARDGILD 120 LNNAAETLKV QKRRIYDITN VLEGIGLIEK KLKNIIYWKG FNAQIPGNVD SDTSMLQVDV 180 ENLSFEERRL DDKIRGLQER LRNLSEDENV QKWLYVTEED IKNLPCFQNE TLIAIKAPHG 240 TTLEVPDPDE AVDYPQRRYR IVLRSTMGPI DVYLVSQFEE KFEEMNVVPP PSSFLHASSS 300 GSNEHLATEV IIGENSRKET EPPAHLSQHS SSCDVNGSNE FPGGIMKIIP SEVDNDADYW 360 LLSDAEVSIT DMWRTDSDIA WDQSDMVPHD FVISDVSAQR SRPASPRPES AEAPYDANLR 420 QR

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MLSDRVSNPG PVHLGCLPHK LKQKGAMYHN MXESNDCIXD QGSSKDALSS IQTPVSAKGG  60
RVYKSKASRR TTSGPQTPIS DTSSFSSLTP AGSCRYDSSL GLLTKKFINL IKQARDGILD  120
LNNAAETLKV QKRRIYDITN VLEGIGLIEK KLKNIIYWKG FNAQIPGNVD SDTSMLQVDV  180
ENLSFEERRL DDKIRGLQER LRNLSEDENV QKWLYVTEED IKNLPCFQNE TLIAIKAPHG  240
TTLEVPDPDE AVDYPQRRYR IVLRSTMGPI DVYLVSQFEE KFEEMNVVPP PSSFLHASSS  300
GSNEHLATEV IIGENSRKET EPPAHLSQHS SSCDVNGSNE FPGGIMKIIP SEVDNDADYW  360
LLSDAEVSIT DMWRTDSDIA WDQSDMVPHD FVISDVSAQR SRPASPRPES AEAPYDANLR  420
QR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	134	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-140	E2F/DP family protein