PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133337.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 25887.5 Da    PI: 8.6821
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.32.1e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +i+n + rqvtfskRr g++KKA+ELSvLCda+va+iifs tgkl+eyss
  XP_022133337.1 10 KIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSS 59
                    69**********************************************96 PP
2K-box54.16.8e-19921711998
           K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      ++++L+kei +  +++R++ Ge+L+ L+++eLqqLe+ Le++l+++ +kK e ++++i++lq+k  el eenk+L++  
  XP_022133337.1  92 SNYTRLNKEIAEKTHQLRQMRGEELQALNIEELQQLEKSLESGLSRVMEKKGERIMKEINDLQRKSAELMEENKRLKQHA 171
                     6799************************************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAKEKIQIRK IDNATARQVT FSKRRRGLFK KAKELSVLCD ADVALIIFSA TGKLFEYSSS  60
SMKGIIERHH LHSKNLQKLE QPSLELQLVE NSNYTRLNKE IAEKTHQLRQ MRGEELQALN  120
IEELQQLEKS LESGLSRVME KKGERIMKEI NDLQRKSAEL MEENKRLKQH ADKMNGVKHI  180
SVEPENLAVE DGQSSNSITE ACVSNSNGGP PQDLESSDTS LKLGLPYSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-98MIKC_MADS family protein