PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133637.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 359aa MW: 40388.6 Da PI: 9.4601

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	147.2	1.1e-45	101	239	2	135
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.........seceaesssssasnsss 87 ++kkdrhski+T++g+RdRRvRls+e+ ++fFdLqd+LG+dk+skt++WLl+++ +aikelt+ + +a +++e+ + s+++ XP_022133637.1 101 TVKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTKKNGAAAlvpknsnlfNNFEECEVISNDE---- 191 78************************************************************555554443322322222333333333.... PP TCP 88 gkaaksaakskksqksaasalnlakesrakarararertrekmriknk 135 +++ + ks+++++ + +akesrakarararert+ek ++k++ XP_022133637.1 192 AEKFMGSSKSSPKKNLVGFHDVVAKESRAKARARARERTKEKIMNKSQ 239 3445555577777777777888999***************999965 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MFSSTNNLHL FPLQQYFPSS SSSSYHHHLV PPPPPPTLPH HHPEANPGDV FLPHDPLGGA 60 PLFLQAPEEG GRMKNEQQEV VVMSQNGHQQ QCFSSTTKKS TVKKDRHSKI YTAQGLRDRR 120 VRLSIEISRK FFDLQDMLGY DKASKTLDWL LTKSRKAIKE LTKKNGAAAL VPKNSNLFNN 180 FEECEVISND EAEKFMGSSK SSPKKNLVGF HDVVAKESRA KARARARERT KEKIMNKSQP 240 LPEILSHQFR PSPPPPPPPA TAEQENNNII GIMWKPSPIT TSNYQKNLVI SKGDAAAYYN 300 NCNNFYFPSN LPPNWDINVD SFARAQSGFC SIANIDSFPE FQVCAKPWDN ACSNNQHLH

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MFSSTNNLHL FPLQQYFPSS SSSSYHHHLV PPPPPPTLPH HHPEANPGDV FLPHDPLGGA  60
PLFLQAPEEG GRMKNEQQEV VVMSQNGHQQ QCFSSTTKKS TVKKDRHSKI YTAQGLRDRR  120
VRLSIEISRK FFDLQDMLGY DKASKTLDWL LTKSRKAIKE LTKKNGAAAL VPKNSNLFNN  180
FEECEVISND EAEKFMGSSK SSPKKNLVGF HDVVAKESRA KARARARERT KEKIMNKSQP  240
LPEILSHQFR PSPPPPPPPA TAEQENNNII GIMWKPSPIT TSNYQKNLVI SKGDAAAYYN  300
NCNNFYFPSN LPPNWDINVD SFARAQSGFC SIANIDSFPE FQVCAKPWDN ACSNNQHLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-27	TCP family protein