PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133706.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 254aa    MW: 28973.7 Da    PI: 8.8551
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.0004991113223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+++++++ +L  H +  H
  XP_022133706.1  91 SCSVCPRVYPTSRLLSLHVSEaH 113
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEVEAQSEFP YWKPFQRRFD PDSPFFASGN VEREILAKQV ALDLTEDEKV QLQSMVVDAA  60
REIFCPIVGC GARLKSLDDF EDHYNARHTA SCSVCPRVYP TSRLLSLHVS EAHDSFFQAK  120
VARGYAMYEC LVEGCGLKFK SYKSRQQHLV DRHSFSASFE FFKKAHPSKK QRQKSHRKQV  180
IQERQETSKM DVESETIDSL ISGVSKLSTS DSTPSSISFG RRHTRGLTFV PRAVQREKVS  240
DSKTAGTKRE NFCI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169175KKQRQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.13e-96C2H2 family protein