PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133787.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 209aa MW: 24018.9 Da PI: 6.0306

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.3e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l ++++ +G g W++ a+ g++Rt+k+c++rw++yl XP_022133787.1 17 KGPWTTEEDLILMNYIAIHGEGVWNSLAKAAGLKRTGKSCRLRWLNYL 64 79********************************************97 PP
2	Myb_DNA-binding	55	1.8e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ d++ ++G++ W++Iar+++ gRt++++k++w++ XP_022133787.1 70 RGNITAEEQLLIMDLHSKWGNR-WSKIARHLP-GRTDNEIKNYWRT 113 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MGTERLSSSQ DEDEVRKGPW TTEEDLILMN YIAIHGEGVW NSLAKAAGLK RTGKSCRLRW 60 LNYLRPDVRR GNITAEEQLL IMDLHSKWGN RWSKIARHLP GRTDNEIKNY WRTRIQKHIK 120 QQEVKSVGEQ MMSVGSCSDT NDDRTISPSS QVSSFGNVAE LMDIGHGYFP SCQGDMEGMA 180 YQQTTWPRGD GENDNYWSME DLWSMQLLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	2e-77	MYB family protein