PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133838.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 1413aa MW: 155546 Da PI: 8.1783

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.8e-09	976	1016	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av+ +G++ ++ I+ ++g +++ qck ++ XP_022133838.1 976 YWTDGEKSLFIEAVRAYGKN-FSMISTHVG-TKSTDQCKIFFS 1016 5***************99.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1413 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFS NKMLENVSSR PSVSHGDGKY ARNGRENRSF SQREWKGHSW 120 ATSNGSTNNC GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDVNGLGT 180 NQRRDREYSV SSSGWKPLKW TRGGGLSSRT STSGHSSSTK SIDALDSNET KSETVLKNES 240 QNLSPSADPA ECAMSSMPCD ETTVRKKPRL GWGEGLAKYE KKKVEVPDGT AFTNVNAEST 300 HSLNSSLIEK GPRGSGFSDC TSPATPSSVV CGSSPGGDEK SSGKAASDND VSNMHGSPGS 360 GFQNQCEEPS FNLEKLDNFS IDDLGSPLIQ LLQSNDSISV DPGIMSCTAM SKLLIYKNEI 420 SKVLETTESE IDLLENELKR LRSESKGSFS FPLASSSLMT GDKNFEEHSD FSNMIPPAAT 480 LPVVTSENNI SKKTLLSTSD SEEVHTDVNE KAVGRFGRSD AMESVITGEK LTISGCSVRD 540 NVVPSVDNSI LIKREAVTLE PISSDINESD DGGDSLFNLI LASNKESACR ASEALISMLP 600 ANEHKIDIWS TNVSCSQNQC LMRERYAKKK RLLRFKERVI TLKYRAYQSL WKESLHVPPV 660 RKLRAKSQKK YQLSLWTNYS GYQKNRSSIR VRIPSSGNPN PVSNTAILRH VSKQLSNSLV 720 KQYRRTLKMP ALVLDQKGKM ASRFVSNNGL VEDPCAVEKE RMMINPWTSE EKDVFMEKLA 780 CFGKDFGKIA TFLDHKTTAD CIEFYYKNHK SDCFEKTKKL EFGKKAKSST STYLVTTGKK 840 WNPETNAASL ELLGAASAMT ACAHKYSSSR SSGRTAYHTT QCDDGLSERA KSFHMFGNER 900 EKVAADVLAG ICGSLSSEAM GSCITSNFDR RDGSQDLKCK KGATTVLRRR MTANIPRFID 960 DEIFSDESCG EMDPSYWTDG EKSLFIEAVR AYGKNFSMIS THVGTKSTDQ CKIFFSKARK 1020 CLGLDLICTA KKMPPDSDDK AKGHECDANG GCHEAGSRMV EDLPKFVTSI NGGEAESMNR 1080 QSAHQEVKES NPSSKICPSN IAGNAVVSDA CNKKDSSDSA FDDNCQSMNS ANDKKDLVRN 1140 QHHAVVSMAA DEIAKEQGAS APTTTSVGFG NAAIDNYGVP NLKVFSTSKV SDPGTKEQLE 1200 RGNVDTSKDR REKVDSHAVD SSSTPINSRV NSLPKHGQGY HHVRVHSRSL SDSEPSSRNG 1260 DVRLFGQILS HPSSSPNSKS GTSENGNHRT QLHKFKRRLK VGSHGNLSAA KFNQEDAPSR 1320 SYGIWDGNRL RTGLSSLPDP TNLLSSYPTF NHYSRSASSP ISKEQKSNGY SQMSEVSSGK 1380 EAVGGIMVGE NCNEDDECNN AEQRVVVAHR REI

Sequence ? help Back to Top

Protein Sequence Length: 1413 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFS NKMLENVSSR PSVSHGDGKY ARNGRENRSF SQREWKGHSW  120
ATSNGSTNNC GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDVNGLGT  180
NQRRDREYSV SSSGWKPLKW TRGGGLSSRT STSGHSSSTK SIDALDSNET KSETVLKNES  240
QNLSPSADPA ECAMSSMPCD ETTVRKKPRL GWGEGLAKYE KKKVEVPDGT AFTNVNAEST  300
HSLNSSLIEK GPRGSGFSDC TSPATPSSVV CGSSPGGDEK SSGKAASDND VSNMHGSPGS  360
GFQNQCEEPS FNLEKLDNFS IDDLGSPLIQ LLQSNDSISV DPGIMSCTAM SKLLIYKNEI  420
SKVLETTESE IDLLENELKR LRSESKGSFS FPLASSSLMT GDKNFEEHSD FSNMIPPAAT  480
LPVVTSENNI SKKTLLSTSD SEEVHTDVNE KAVGRFGRSD AMESVITGEK LTISGCSVRD  540
NVVPSVDNSI LIKREAVTLE PISSDINESD DGGDSLFNLI LASNKESACR ASEALISMLP  600
ANEHKIDIWS TNVSCSQNQC LMRERYAKKK RLLRFKERVI TLKYRAYQSL WKESLHVPPV  660
RKLRAKSQKK YQLSLWTNYS GYQKNRSSIR VRIPSSGNPN PVSNTAILRH VSKQLSNSLV  720
KQYRRTLKMP ALVLDQKGKM ASRFVSNNGL VEDPCAVEKE RMMINPWTSE EKDVFMEKLA  780
CFGKDFGKIA TFLDHKTTAD CIEFYYKNHK SDCFEKTKKL EFGKKAKSST STYLVTTGKK  840
WNPETNAASL ELLGAASAMT ACAHKYSSSR SSGRTAYHTT QCDDGLSERA KSFHMFGNER  900
EKVAADVLAG ICGSLSSEAM GSCITSNFDR RDGSQDLKCK KGATTVLRRR MTANIPRFID  960
DEIFSDESCG EMDPSYWTDG EKSLFIEAVR AYGKNFSMIS THVGTKSTDQ CKIFFSKARK  1020
CLGLDLICTA KKMPPDSDDK AKGHECDANG GCHEAGSRMV EDLPKFVTSI NGGEAESMNR  1080
QSAHQEVKES NPSSKICPSN IAGNAVVSDA CNKKDSSDSA FDDNCQSMNS ANDKKDLVRN  1140
QHHAVVSMAA DEIAKEQGAS APTTTSVGFG NAAIDNYGVP NLKVFSTSKV SDPGTKEQLE  1200
RGNVDTSKDR REKVDSHAVD SSSTPINSRV NSLPKHGQGY HHVRVHSRSL SDSEPSSRNG  1260
DVRLFGQILS HPSSSPNSKS GTSENGNHRT QLHKFKRRLK VGSHGNLSAA KFNQEDAPSR  1320
SYGIWDGNRL RTGLSSLPDP TNLLSSYPTF NHYSRSASSP ISKEQKSNGY SQMSEVSSGK  1380
EAVGGIMVGE NCNEDDECNN AEQRVVVAHR REI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-128	MYB family protein